Turning SymPy expressions into JAX functions

Overview

sympy2jax

.github/workflows/CI.yml

Turn SymPy expressions into parametrized, differentiable, vectorizable, JAX functions.

All SymPy floats become trainable input parameters. SymPy symbols become columns of a passed matrix.

Installation

pip install git+https://github.com/MilesCranmer/sympy2jax.git

Example

import sympy
from sympy import symbols
import jax
import jax.numpy as jnp
from jax import random
from sympy2jax import sympy2jax

Let's create an expression in SymPy:

x, y = symbols('x y')
expression = 1.0 * sympy.cos(x) + 3.2 * y

Let's get the JAX version. We pass the equation, and the symbols required.

f, params = sympy2jax(expression, [x, y])

The order you supply the symbols is the same order you should supply the features when calling the function f (shape [nrows, nfeatures]). In this case, features=2 for x and y. The params in this case will be jnp.array([1.0, 3.2]). You pass these parameters when calling the function, which will let you change them and take gradients.

Let's generate some JAX data to pass:

key = random.PRNGKey(0)
X = random.normal(key, (10, 2))

We can call the function with:

f(X, params)

#> DeviceArray([-2.6080756 ,  0.72633684, -6.7557726 , -0.2963162 ,
#                6.6014843 ,  5.032483  , -0.810931  ,  4.2520013 ,
#                3.5427954 , -2.7479894 ], dtype=float32)

We can take gradients with respect to the parameters for each row with JAX gradient parameters now:

jac_f = jax.jacobian(f, argnums=1)
jac_f(X, params)

#> DeviceArray([[ 0.49364874, -0.9692889 ],
#               [ 0.8283714 , -0.0318858 ],
#               [-0.7447336 , -1.8784496 ],
#               [ 0.70755106, -0.3137085 ],
#               [ 0.944834  ,  1.767703  ],
#               [ 0.51673377,  1.4111717 ],
#               [ 0.87347716, -0.52637756],
#               [ 0.8760679 ,  1.0549792 ],
#               [ 0.9961824 ,  0.79581654],
#               [-0.88465923, -0.5822907 ]], dtype=float32)

We can also JIT-compile our function:

compiled_f = jax.jit(f)
compiled_f(X, params)

#> DeviceArray([-2.6080756 ,  0.72633684, -6.7557726 , -0.2963162 ,
#                6.6014843 ,  5.032483  , -0.810931  ,  4.2520013 ,
#                3.5427954 , -2.7479894 ], dtype=float32)
Owner
Miles Cranmer
Astro PhD candidate @princeton trying to accelerate astrophysics with AI. I build interpretable ML algorithms.
Miles Cranmer
PIXIE: Collaborative Regression of Expressive Bodies

PIXIE: Collaborative Regression of Expressive Bodies [Project Page] This is the official Pytorch implementation of PIXIE. PIXIE reconstructs an expres

Yao Feng 331 Jan 04, 2023
Machine Learning toolbox for Humans

Reproducible Experiment Platform (REP) REP is ipython-based environment for conducting data-driven research in a consistent and reproducible way. Main

Yandex 662 Nov 20, 2022
Code of Puregaze: Purifying gaze feature for generalizable gaze estimation, AAAI 2022.

PureGaze: Purifying Gaze Feature for Generalizable Gaze Estimation Description Our work is accpeted by AAAI 2022. Picture: We propose a domain-general

39 Dec 05, 2022
Code for sound field predictions in domains with impedance boundaries. Used for generating results from the paper

Code for sound field predictions in domains with impedance boundaries. Used for generating results from the paper

DTU Acoustic Technology Group 11 Dec 17, 2022
Implementation of character based convolutional neural network

Character Based CNN This repo contains a PyTorch implementation of a character-level convolutional neural network for text classification. The model a

Ahmed BESBES 248 Nov 21, 2022
Contextual Attention Network: Transformer Meets U-Net

Contextual Attention Network: Transformer Meets U-Net Contexual attention network for medical image segmentation with state of the art results on skin

Reza Azad 67 Nov 28, 2022
Estimation of human density in a closed space using deep learning.

Siemens HOLLZOF challenge - Human Density Estimation Add project description here. Installing Dependencies: Install Python3 either system-wide, user-w

3 Aug 08, 2021
Improving Transferability of Representations via Augmentation-Aware Self-Supervision

Improving Transferability of Representations via Augmentation-Aware Self-Supervision Accepted to NeurIPS 2021 TL;DR: Learning augmentation-aware infor

hankook 38 Sep 16, 2022
level1-image-classification-level1-recsys-09 created by GitHub Classroom

level1-image-classification-level1-recsys-09 ❗ 주제 설명 COVID-19 Pandemic 상황 속 마스크 착용 유무 판단 시스템 구축 마스크 착용 여부, 성별, 나이 총 세가지 기준에 따라 총 18개의 class로 구분하는 모델 ?

6 Mar 17, 2022
Random-Afg - Afghanistan Random Old Idz Cloner Tools

AFGHANISTAN RANDOM OLD IDZ CLONER TOOLS Install $ apt update $ apt upgrade $ apt

MAHADI HASAN AFRIDI 5 Jan 26, 2022
A Light in the Dark: Deep Learning Practices for Industrial Computer Vision

A Light in the Dark: Deep Learning Practices for Industrial Computer Vision This is the repository for our Paper/Contribution to the WI2022 in Nürnber

Maximilian Harl 6 Jan 17, 2022
Jaxtorch (a jax nn library)

Jaxtorch (a jax nn library) This is my jax based nn library. I created this because I was annoyed by the complexity and 'magic'-ness of the popular ja

nshepperd 17 Dec 08, 2022
Anti-Adversarially Manipulated Attributions for Weakly and Semi-Supervised Semantic Segmentation (CVPR 2021)

Anti-Adversarially Manipulated Attributions for Weakly and Semi-Supervised Semantic Segmentation Input Image Initial CAM Successive Maps with adversar

Jungbeom Lee 110 Dec 07, 2022
The official implementation of NeurIPS 2021 paper: Finding Optimal Tangent Points for Reducing Distortions of Hard-label Attacks

The official implementation of NeurIPS 2021 paper: Finding Optimal Tangent Points for Reducing Distortions of Hard-label Attacks

machen 11 Nov 27, 2022
Audio Domain Adaptation for Acoustic Scene Classification using Disentanglement Learning

Audio Domain Adaptation for Acoustic Scene Classification using Disentanglement Learning Reference Abeßer, J. & Müller, M. Towards Audio Domain Adapt

Jakob Abeßer 2 Jul 06, 2022
Code for the paper "Adapting Monolingual Models: Data can be Scarce when Language Similarity is High"

Wietse de Vries • Martijn Bartelds • Malvina Nissim • Martijn Wieling Adapting Monolingual Models: Data can be Scarce when Language Similarity is High

Wietse de Vries 5 Aug 02, 2021
A Pytorch implementation of CVPR 2021 paper "RSG: A Simple but Effective Module for Learning Imbalanced Datasets"

RSG: A Simple but Effective Module for Learning Imbalanced Datasets (CVPR 2021) A Pytorch implementation of our CVPR 2021 paper "RSG: A Simple but Eff

120 Dec 12, 2022
Procedural 3D data generation pipeline for architecture

Synthetic Dataset Generator Authors: Stanislava Fedorova Alberto Tono Meher Shashwat Nigam Jiayao Zhang Amirhossein Ahmadnia Cecilia bolognesi Dominik

Computational Design Institute 49 Nov 25, 2022
Building a real-time environment using webcam frame division in OpenCV and classify cropped images using a fine-tuned vision transformers on hybryd datasets samples for facial emotion recognition.

Visual Transformer for Facial Emotion Recognition (FER) This project has the aim to build an efficient Visual Transformer for the Facial Emotion Recog

Mario Sessa 8 Dec 12, 2022
Spline is a tool that is capable of running locally as well as part of well known pipelines like Jenkins (Jenkinsfile), Travis CI (.travis.yml) or similar ones.

Welcome to spline - the pipeline tool Important note: Since change in my job I didn't had the chance to continue on this project. My main new project

Thomas Lehmann 29 Aug 22, 2022