Potato Disease Classification - Training, Rest APIs, and Frontend to test.

Overview

Potato Disease Classification

Setup for Python:

  1. Install Python (Setup instructions)

  2. Install Python packages

pip3 install -r training/requirements.txt
pip3 install -r api/requirements.txt
  1. Install Tensorflow Serving (Setup instructions)

Setup for ReactJS

  1. Install Nodejs (Setup instructions)
  2. Install NPM (Setup instructions)
  3. Install dependencies
cd frontend
npm install --from-lock-json
npm audit fix
  1. Copy .env.example as .env.

  2. Change API url in .env.

Setup for React-Native app

  1. Go to the React Native environment setup, then select React Native CLI Quickstart tab.

  2. Install dependencies

cd mobile-app
yarn install
  • 2.1 Only for mac users
cd ios && pod install && cd ../
  1. Copy .env.example as .env.

  2. Change API url in .env.

Training the Model

  1. Download the data from kaggle.
  2. Only keep folders related to Potatoes.
  3. Run Jupyter Notebook in Browser.
jupyter notebook
  1. Open training/potato-disease-training.ipynb in Jupyter Notebook.
  2. In cell #2, update the path to dataset.
  3. Run all the Cells one by one.
  4. Copy the model generated and save it with the version number in the models folder.

Running the API

Using FastAPI

  1. Get inside api folder
cd api
  1. Run the FastAPI Server using uvicorn
uvicorn main:app --reload --host 0.0.0.0
  1. Your API is now running at 0.0.0.0:8000

Using FastAPI & TF Serve

  1. Get inside api folder
cd api
  1. Copy the models.config.example as models.config and update the paths in file.
  2. Run the TF Serve (Update config file path below)
docker run -t --rm -p 8501:8501 -v C:/Code/potato-disease-classification:/potato-disease-classification tensorflow/serving --rest_api_port=8501 --model_config_file=/potato-disease-classification/models.config
  1. Run the FastAPI Server using uvicorn For this you can directly run it from your main.py or main-tf-serving.py using pycharm run option (as shown in the video tutorial) OR you can run it from command prompt as shown below,
uvicorn main-tf-serving:app --reload --host 0.0.0.0
  1. Your API is now running at 0.0.0.0:8000

Running the Frontend

  1. Get inside api folder
cd frontend
  1. Copy the .env.example as .env and update REACT_APP_API_URL to API URL if needed.
  2. Run the frontend
npm run start

Running the app

  1. Get inside mobile-app folder
cd mobile-app
  1. Copy the .env.example as .env and update URL to API URL if needed.

  2. Run the app (android/iOS)

npm run android

or

npm run ios
  1. Creating public (signed APK)

Creating the TF Lite Model

  1. Run Jupyter Notebook in Browser.
jupyter notebook
  1. Open training/tf-lite-converter.ipynb in Jupyter Notebook.
  2. In cell #2, update the path to dataset.
  3. Run all the Cells one by one.
  4. Model would be saved in tf-lite-models folder.

Deploying the TF Lite on GCP

  1. Create a GCP account.
  2. Create a Project on GCP (Keep note of the project id).
  3. Create a GCP bucket.
  4. Upload the potatoes.h5 model in the bucket in the path models/potatos.h5.
  5. Install Google Cloud SDK (Setup instructions).
  6. Authenticate with Google Cloud SDK.
gcloud auth login
  1. Run the deployment script.
cd gcp
gcloud functions deploy predict_lite --runtime python38 --trigger-http --memory 512 --project project_id
  1. Your model is now deployed.
  2. Use Postman to test the GCF using the Trigger URL.

Inspiration: https://cloud.google.com/blog/products/ai-machine-learning/how-to-serve-deep-learning-models-using-tensorflow-2-0-with-cloud-functions

Deploying the TF Model (.h5) on GCP

  1. Create a GCP account.
  2. Create a Project on GCP (Keep note of the project id).
  3. Create a GCP bucket.
  4. Upload the tf .h5 model generate in the bucket in the path models/potato-model.h5.
  5. Install Google Cloud SDK (Setup instructions).
  6. Authenticate with Google Cloud SDK.
gcloud auth login
  1. Run the deployment script.
cd gcp
gcloud functions deploy predict --runtime python38 --trigger-http --memory 512 --project project_id
  1. Your model is now deployed.
  2. Use Postman to test the GCF using the Trigger URL.

Inspiration: https://cloud.google.com/blog/products/ai-machine-learning/how-to-serve-deep-learning-models-using-tensorflow-2-0-with-cloud-functions

Owner
codebasics
codebasics
Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2

CoaDTI Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2 Abstract Environment The test was conducted i

Layne_Huang 7 Nov 14, 2022
A Transformer-Based Siamese Network for Change Detection

ChangeFormer: A Transformer-Based Siamese Network for Change Detection (Under review at IGARSS-2022) Wele Gedara Chaminda Bandara, Vishal M. Patel Her

Wele Gedara Chaminda Bandara 214 Dec 29, 2022
Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)

Karate Club is an unsupervised machine learning extension library for NetworkX. Please look at the Documentation, relevant Paper, Promo Video, and Ext

Benedek Rozemberczki 1.8k Jan 07, 2023
This repo includes the CUB-GHA (Gaze-based Human Attention) dataset and code of the paper "Human Attention in Fine-grained Classification".

HA-in-Fine-Grained-Classification This repo includes the CUB-GHA (Gaze-based Human Attention) dataset and code of the paper "Human Attention in Fine-g

16 Oct 29, 2022
Python implementation of NARS (Non-Axiomatic-Reasoning-System)

Python implementation of NARS (Non-Axiomatic-Reasoning-System)

Bowen XU 11 Dec 20, 2022
Neural Factorization of Shape and Reflectance Under An Unknown Illumination

NeRFactor [Paper] [Video] [Project] This is the authors' code release for: NeRFactor: Neural Factorization of Shape and Reflectance Under an Unknown I

Google 283 Jan 04, 2023
Meli Data Challenge 2021 - First Place Solution

My solution for the Meli Data Challenge 2021

Matias Moreyra 23 Mar 09, 2022
Official page of Patchwork (RA-L'21 w/ IROS'21)

Patchwork Official page of "Patchwork: Concentric Zone-based Region-wise Ground Segmentation with Ground Likelihood Estimation Using a 3D LiDAR Sensor

Hyungtae Lim 254 Jan 05, 2023
MDETR: Modulated Detection for End-to-End Multi-Modal Understanding

MDETR: Modulated Detection for End-to-End Multi-Modal Understanding Website • Colab • Paper This repository contains code and links to pre-trained mod

Aishwarya Kamath 770 Dec 28, 2022
Bayesian optimization in PyTorch

BoTorch is a library for Bayesian Optimization built on PyTorch. BoTorch is currently in beta and under active development! Why BoTorch ? BoTorch Prov

2.5k Dec 31, 2022
Make a Turtlebot3 follow a figure 8 trajectory and create a robot arm and make it follow a trajectory

HW2 - ME 495 Overview Part 1: Makes the robot move in a figure 8 shape. The robot starts moving when launched on a real turtlebot3 and can be paused a

Devesh Bhura 0 Oct 21, 2022
Bulk2Space is a spatial deconvolution method based on deep learning frameworks

Bulk2Space Spatially resolved single-cell deconvolution of bulk transcriptomes using Bulk2Space Bulk2Space is a spatial deconvolution method based on

Dr. FAN, Xiaohui 60 Dec 27, 2022
Official implementation of "Learning Proposals for Practical Energy-Based Regression", 2021.

ebms_proposals Official implementation (PyTorch) of the paper: Learning Proposals for Practical Energy-Based Regression, 2021 [arXiv] [project]. Fredr

Fredrik Gustafsson 10 Oct 22, 2022
Unified Interface for Constructing and Managing Workflows on different workflow engines, such as Argo Workflows, Tekton Pipelines, and Apache Airflow.

Couler What is Couler? Couler aims to provide a unified interface for constructing and managing workflows on different workflow engines, such as Argo

Couler Project 781 Jan 03, 2023
Minimal PyTorch implementation of Generative Latent Optimization from the paper "Optimizing the Latent Space of Generative Networks"

Minimal PyTorch implementation of Generative Latent Optimization This is a reimplementation of the paper Piotr Bojanowski, Armand Joulin, David Lopez-

Thomas Neumann 117 Nov 27, 2022
Code and models for ICCV2021 paper "Robust Object Detection via Instance-Level Temporal Cycle Confusion".

Robust Object Detection via Instance-Level Temporal Cycle Confusion This repo contains the implementation of the ICCV 2021 paper, Robust Object Detect

Xin Wang 69 Oct 13, 2022
Multimodal Co-Attention Transformer (MCAT) for Survival Prediction in Gigapixel Whole Slide Images

Multimodal Co-Attention Transformer (MCAT) for Survival Prediction in Gigapixel Whole Slide Images [ICCV 2021] © Mahmood Lab - This code is made avail

Mahmood Lab @ Harvard/BWH 63 Dec 01, 2022
Implementation of Bottleneck Transformer in Pytorch

Bottleneck Transformer - Pytorch Implementation of Bottleneck Transformer, SotA visual recognition model with convolution + attention that outperforms

Phil Wang 621 Jan 06, 2023
Code for the paper "Spatio-temporal Self-Supervised Representation Learning for 3D Point Clouds" (ICCV 2021)

Spatio-temporal Self-Supervised Representation Learning for 3D Point Clouds This is the official code implementation for the paper "Spatio-temporal Se

Hesper 63 Jan 05, 2023
Ian Covert 130 Jan 01, 2023