Universal Probability Distributions with Optimal Transport and Convex Optimization

Overview

Sylvester normalizing flows for variational inference

Pytorch implementation of Sylvester normalizing flows, based on our paper:

Sylvester normalizing flows for variational inference (UAI 2018)
Rianne van den Berg*, Leonard Hasenclever*, Jakub Tomczak, Max Welling

*Equal contribution

Requirements

The latest release of the code is compatible with:

  • pytorch 1.0.0

  • python 3.7

Thanks to Martin Engelcke for adapting the code to provide this compatibility.

Version v0.3.0_2.7 is compatible with:

  • pytorch 0.3.0 WARNING: More recent versions of pytorch have different default flags for the binary cross entropy loss module: nn.BCELoss(). You have to adapt the appropriate flags if you want to port this code to a later vers
    ion.

  • python 2.7

Data

The experiments can be run on the following datasets:

  • static MNIST: dataset is in data folder;
  • OMNIGLOT: the dataset can be downloaded from link;
  • Caltech 101 Silhouettes: the dataset can be downloaded from link.
  • Frey Faces: the dataset can be downloaded from link.

Usage

Below, example commands are given for running experiments on static MNIST with different types of Sylvester normalizing flows, for 4 flows:

Orthogonal Sylvester flows
This example uses a bottleneck of size 8 (Q has 8 columns containing orthonormal vectors).

python main_experiment.py -d mnist -nf 4 --flow orthogonal --num_ortho_vecs 8 

Householder Sylvester flows
This example uses 8 Householder reflections per orthogonal matrix Q.

python main_experiment.py -d mnist -nf 4 --flow householder --num_householder 8

Triangular Sylvester flows

python main_experiment.py -d mnist -nf 4 --flow triangular 

To run an experiment with other types of normalizing flows or just with a factorized Gaussian posterior, see below.


Factorized Gaussian posterior

python main_experiment.py -d mnist --flow no_flow

Planar flows

python main_experiment.py -d mnist -nf 4 --flow planar

Inverse Autoregressive flows
This examples uses MADEs with 320 hidden units.

python main_experiment.py -d mnist -nf 4 --flow iaf --made_h_size 320

More information about additional argument options can be found by running ```python main_experiment.py -h```

Cite

Please cite our paper if you use this code in your own work:

@inproceedings{vdberg2018sylvester,
  title={Sylvester normalizing flows for variational inference},
  author={van den Berg, Rianne and Hasenclever, Leonard and Tomczak, Jakub and Welling, Max},
  booktitle={proceedings of the Conference on Uncertainty in Artificial Intelligence (UAI)},
  year={2018}
}
Comments
  • about log_p_zk

    about log_p_zk

    Hi Rianne, This is a great code, and I have a little question about logp(zk), we hope p(zk) in VAE can be a distribution whose form is no fixed, but it seems that the calculate of logp(zk) in line81 of loss.py imply that p(zk) is a standard Gaussion. Are there some mistakes about my understanding?
    Thank your for this code

    opened by Archer666 10
  • loss = bce + beta * kl

    loss = bce + beta * kl

    hello Rianne: Thanks very much. I am a bit confused with line 44 in loss.py : loss = bce + beta * kl. Based on equation 3 in Tomczak's paper (Improving Variational Auto-Encoder Using Householder Flows), shouldn't "loss = bce - beta * kl "? Also, why use -ELBO instead of ELBO when reporting your metrics? Thanks

    opened by tumis1946 4
  • PyTorch_v1 and Python3 compatibility

    PyTorch_v1 and Python3 compatibility

    Hi Rianne,

    This PR contains a 'minimal' set of changes to run the code with the latest PyTorch versions and Python 3 ( #1 #2 )

    It is 'minimal' in the sense that I only made changes that affect functionality. There are additional cosmetic changes that could be made; e.g. Variable(), the volatile flag, and F.sigmoid() have been deprecated but they should not affect functionality.

    I tested the changes with PyTorch 1.0.0 and Python 3.7 on MNIST and Freyfaces, giving me similar results for the baseline VAE without any flows.

    I am not sure if more rigorous test should be done and if you want to merge this into master or keep a separate branch.

    Best, Martin

    opened by martinengelcke 1
  • PR for PyTorch 1.+ and Python 3 support

    PR for PyTorch 1.+ and Python 3 support

    Hi Rianne,

    Thank you for this really nice code release :)

    I cloned the repo and made some changes so that it runs with PyTorch 1.+ and Python 3. Also solved the issue mentioned in #1 . I tested the changes on MNIST (binary input) and Freyfaces (multinomial input), giving similar results to the original code.

    If you are interested in reviewing and potentially adding this to the repo, I would be happy to clean things up and make a PR.

    Best, Martin

    opened by martinengelcke 1
  • RuntimeError in default main experiment

    RuntimeError in default main experiment

    Hi Rianne,

    I'm trying to run the default experiment on cpu with a small latent space dimension (z=5):

    python main_experiment.py -d mnist --flow no_flow -nc --z_size 5

    Which unfortunately gives the following error:

    Traceback (most recent call last):
      File "main_experiment.py", line 278, in <module>
        run(args, kwargs)
      File "main_experiment.py", line 189, in run
        tr_loss = train(epoch, train_loader, model, optimizer, args)
      File ".../sylvester-flows/optimization/training.py", line 39, in train
        loss.backward()
      File "//anaconda/envs/dl/lib/python3.6/site-packages/torch/tensor.py", line 102, in backward
        torch.autograd.backward(self, gradient, retain_graph, create_graph)
      File "//anaconda/envs/dl/lib/python3.6/site-packages/torch/autograd/__init__.py", line 90, in backward
        allow_unreachable=True)  # allow_unreachable flag
    RuntimeError: one of the variables needed for gradient computation has been modified by an inplace operation
    

    I am using PyTorch version 1.0.0 and did not modify the code.

    opened by trdavidson 1
  • How to sample from latent distribution

    How to sample from latent distribution

    Hello,

    I was wondering how I can generate samples using the decoder network after training. In a VAE, I would just sample from the prior distribution z~N(0,1) and generate a data point using the decoder. In TriangularSylvesterVAE, however, I also have to provide hyperparameters lambda(x) that depend on the input. How can I sample from my latent distribution and generate samples from it?

    I am new to normalizing flows in general and would appreciate any help.

    opened by crlz182 2
Releases(v1.0.0_3.7)
  • v1.0.0_3.7(Jul 5, 2019)

    Sylvester Normalizing Flow repository compatible with Pytorch 1.0.0 and Python 3.7. Thanks to martinengelcke for taking care of this compatibility.

    Source code(tar.gz)
    Source code(zip)
  • v0.3.0_2.7(Jul 5, 2019)

Owner
Rianne van den Berg
Senior researcher @Microsoft research Amsterdam. Formerly at Google Brain and University of Amsterdam
Rianne van den Berg
A simple Python configuration file operator.

A simple Python configuration file operator This project provides a common way to read configurations using config42. Installation It is possible to i

Scott Lau 2 Nov 08, 2021
Warning: This project does not have any current developer. See bellow.

Pylearn2: A machine learning research library Warning : This project does not have any current developer. We will continue to review pull requests and

Laboratoire d’Informatique des Systèmes Adaptatifs 2.7k Dec 26, 2022
Public repository containing materials used for Feed Forward (FF) Neural Networks article.

Art041_NN_Feed_Forward Public repository containing materials used for Feed Forward (FF) Neural Networks article. -- Illustration of a very simple Fee

SolClover 2 Dec 29, 2021
DCSL - Generalizable Crowd Counting via Diverse Context Style Learning

DCSL Generalizable Crowd Counting via Diverse Context Style Learning Requirement

3 Jun 13, 2022
Kroomsa: A search engine for the curious

Kroomsa A search engine for the curious. It is a search algorithm designed to en

Wingify 7 Jun 20, 2022
BuildingNet: Learning to Label 3D Buildings

BuildingNet This is the implementation of the BuildingNet architecture described in this paper: Paper: BuildingNet: Learning to Label 3D Buildings Arx

16 Nov 07, 2022
HairCLIP: Design Your Hair by Text and Reference Image

Overview This repository hosts the official PyTorch implementation of the paper: "HairCLIP: Design Your Hair by Text and Reference Image". Our single

322 Jan 06, 2023
Release of the ConditionalQA dataset

ConditionalQA Datasets accompanying the paper ConditionalQA: A Complex Reading Comprehension Dataset with Conditional Answers. Disclaimer This dataset

14 Oct 17, 2022
Unofficial Pytorch Implementation of WaveGrad2

WaveGrad 2 — Unofficial PyTorch Implementation WaveGrad 2: Iterative Refinement for Text-to-Speech Synthesis Unofficial PyTorch+Lightning Implementati

MINDs Lab 104 Nov 29, 2022
[ICCV'21] PlaneTR: Structure-Guided Transformers for 3D Plane Recovery

PlaneTR: Structure-Guided Transformers for 3D Plane Recovery This is the official implementation of our ICCV 2021 paper News There maybe some bugs in

73 Nov 30, 2022
Amazon Forest Computer Vision: Satellite Image tagging code using PyTorch / Keras with lots of PyTorch tricks

Amazon Forest Computer Vision Satellite Image tagging code using PyTorch / Keras Here is a sample of images we had to work with Source: https://www.ka

Mamy Ratsimbazafy 359 Jan 05, 2023
Code for "Discovering Non-monotonic Autoregressive Orderings with Variational Inference" (paper and code updated from ICLR 2021)

Discovering Non-monotonic Autoregressive Orderings with Variational Inference Description This package contains the source code implementation of the

Xuanlin (Simon) Li 10 Dec 29, 2022
Measure WWjj polarization fraction

WlWl Polarization Measure WWjj polarization fraction Paper: arXiv:2109.09924 Notice: This code can only be used for the inference process, if you want

4 Apr 10, 2022
Pytorch implementation of “Recursive Non-Autoregressive Graph-to-Graph Transformer for Dependency Parsing with Iterative Refinement”

Graph-to-Graph Transformers Self-attention models, such as Transformer, have been hugely successful in a wide range of natural language processing (NL

Idiap Research Institute 40 Aug 14, 2022
(ICCV 2021) ProHMR - Probabilistic Modeling for Human Mesh Recovery

ProHMR - Probabilistic Modeling for Human Mesh Recovery Code repository for the paper: Probabilistic Modeling for Human Mesh Recovery Nikos Kolotouros

Nikos Kolotouros 209 Dec 13, 2022
Spiking Neural Network for Computer Vision using SpikingJelly framework and Pytorch-Lightning

Spiking Neural Network for Computer Vision using SpikingJelly framework and Pytorch-Lightning

Sami BARCHID 2 Oct 20, 2022
Source Code for ICSE 2022 Paper - ``Can We Achieve Fairness Using Semi-Supervised Learning?''

Fair-SSL Source Code for ICSE 2022 Paper - Can We Achieve Fairness Using Semi-Supervised Learning? Ethical bias in machine learning models has become

1 Dec 18, 2021
Probabilistic-Monocular-3D-Human-Pose-Estimation-with-Normalizing-Flows

Probabilistic-Monocular-3D-Human-Pose-Estimation-with-Normalizing-Flows This is the official implementation of the ICCV 2021 Paper "Probabilistic Mono

62 Nov 23, 2022
Code for Motion Representations for Articulated Animation paper

Motion Representations for Articulated Animation This repository contains the source code for the CVPR'2021 paper Motion Representations for Articulat

Snap Research 851 Jan 09, 2023
This repository contains all data used for writing a research paper Multiple Object Trackers in OpenCV: A Benchmark, presented in ISIE 2021 conference in Kyoto, Japan.

OpenCV-Multiple-Object-Tracking Python is version 3.6.7 to install opencv: pip uninstall opecv-python pip uninstall opencv-contrib-python pip install

6 Dec 19, 2021